Research: Exome sequencing in fetuses with congenital diaphragmatic hernia in a nationwide cohort

Prenat Diagn

. 2024 Jun 11.

 doi: 10.1002/pd.6622. Online ahead of print. https://pubmed.ncbi.nlm.nih.gov/38862387/

Exome sequencing in fetuses with congenital diaphragmatic hernia in a nationwide cohort

Katinka Weller 1Dineke Westra 2Nina C J Peters 1Martina Wilke 3Diane Van Opstal 3Ilse Feenstra 2Joris van Drongelen 4Alex J Eggink 1Karin E M Diderich 3Philip L J DeKoninck 1

Affiliations expand

Abstract

Objective: To evaluate the diagnostic yield of exome sequencing (ES) in fetuses and neonates with prenatally detected congenital diaphragmatic hernia (CDH) and normal copy number variant (CNV) analysis.

Methods: We conducted a retrospective cohort study of prenatally diagnosed CDH cases seen between 2019 and 2022. All cases who underwent prenatal or postnatal genetic testing were reviewed. The results from the ES analysis that identified pathogenic or likely pathogenic single nucleotide variants are described.

Results: In total, 133 fetuses with CDH were seen, of whom 98 (74%) had an isolated CDH and 35 (26%) had a complex CDH (associated structural anomalies) on prenatal examination. ES was performed in 68 cases, and eight pathogenic or likely pathogenic variants were found, accounting for a 12% diagnostic yield (10% [5/50] in isolated cases and 17% [3/18] in complex CDH).

Conclusions: In 12% of fetuses and neonates with CDH and normal CNV analysis results, pathogenic or likely pathogenic variants were identified with ES. These data indicate that there is a substantial diagnostic yield when offering ES in prenatally detected CDH, both in complex and isolated cases.

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